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Tutorial
Network Dynamics and Cell Physiology
Date Title / Speaker
April 17, 2008 Lecture 3: Cell cycle regulation
John Tyson (Virginia Polytechnic Institute and State University)
Tutorial
April 17, 2008 Lecture 2: Network motifs: sniffers, buzzers, toggles and blinkers
John Tyson (Virginia Polytechnic Institute and State University)
Tutorial
April 17, 2008 Lecture 1: Cell physiology, molecular biology and mathematical modeling
John Tyson (Virginia Polytechnic Institute and State University)
Tutorial
Public Lecture
The Best of All Possible Worlds: The Idea of Optimization
Date Title / Speaker
March 04, 2008 The Best of All Possible Worlds: The Idea of Optimization
Ivar Ekeland (University of British Columbia)
Public Lecture
Mathematical Modeling in Medicine, Sports, and the Environment
Date Title / Speaker
February 13, 2008 Mathematical Modeling in Medicine, Sports, and the Environment
Alfio Quarteroni (Politecnico di Milano)
Public Lecture
Annual Program Workshop
Organization of Biological Networks
Date Title / Speaker
March 07, 2008 The Vertebrate Segmentation Clock: Converting Time into Embryonic Pattern
Olivier Pourquié (Stowers Institute)
Annual Program Workshop
March 06, 2008 Modularity, Feedback and Recursion in the EGF Receptor System
H. Steven Wiley (Pacific Northwest National Laboratories)
Annual Program Workshop
March 06, 2008 Inference of Morphogenic Pathways from Live Cell Images
Gaudenz Danuser (Scripps Research Institute)
Annual Program Workshop
March 06, 2008 Drosophila Morphogenesis: Tissue Dynamics and Emergent Properties During Dorsal Closure


Glenn Edwards (Duke University)
Annual Program Workshop
March 06, 2008 Signaling Networks in Chemotaxis and Cytokinesis
Peter Devreotes (Johns Hopkins University)
Annual Program Workshop
March 06, 2008 Modeling Histone Mediated Epigenetics as a Positive Feedback Process
Kim Sneppen (University of Copenhagen)
Annual Program Workshop
March 05, 2008 Estimating Neuronal Network Connectivity
Duane Nykamp (University of Minnesota, Twin Cities)
Annual Program Workshop
March 05, 2008 Bayesian Network Algorithms for Revealing Structure of Complex Biological Networks
Victoria Stokes (University of St. Andrews)
Annual Program Workshop
March 05, 2008 Adaptation-driven Models of Cancer Invasion: Experimental Parameterization and Validation
Vito Quaranta (Vanderbilt University)
Annual Program Workshop
March 04, 2008 A Bottom-up Approach to Deciphering and Predicting Cis-regulatory Transcriptional Grammar in Drosophila
Walid Fakhouri (Michigan State University)
Annual Program Workshop
March 04, 2008 Robustness of Signal Processing in Bacterial Chemotaxis
Markus Kollmann (Humboldt-Universität)
Annual Program Workshop
March 04, 2008 Mapping Evolutionary Pathways of HIV-1 Drug Resistance Using Conditional Selection Pressure
Christopher Lee (University of California, Los Angeles)
Annual Program Workshop
March 04, 2008 Circadian Clocks and Switches in Cynanobacteria


Daniel Fisher (Stanford University)
Annual Program Workshop
March 03, 2008 Quantifying and Predicting Gene Regulation in Single Cells
Peter Swain (McGill University)
Annual Program Workshop
March 03, 2008 Noisy Out of Necessity: Probabilistic Behavior in Cellular Differentiation
Gürol Süel (UT Southwestern Medical Center)
Annual Program Workshop
March 03, 2008 Noise and Dynamics of the Flagellar Length Control System
Wallace Marshall (University of California, San Francisco)
Annual Program Workshop
March 03, 2008 The Evolutionary Design of Proteins
Rama Ranganathan (UT Southwestern Medical Center)
Annual Program Workshop
Protein Folding
Date Title / Speaker
January 18, 2008 Simulations of Peptide Folding and Dynamics
Krzysztof Kuczera (University of Kansas)
Annual Program Workshop
January 18, 2008 Simulations on BlueGene of a Fast Folding Mutant of Lambda(6-85)
Annual Program Workshop
January 18, 2008 The Limitations of Temperature Replica Exchange (T-REMD) for Protein Folding
Jed Pitera (IBM Research Division)
Annual Program Workshop
January 17, 2008 Multistage Optimization for Protein-protein Docking
Sandor Vajda (Boston University)
Annual Program Workshop
January 17, 2008 Cluster Optimization in Protein Docking
Julie Mitchell (University of Wisconsin, Madison)
Annual Program Workshop
January 17, 2008 Structure-based Maximal Affinity Model Predicts Small-molecule Druggability
Alan Cheng (Amgen Cambridge Research Center)
Annual Program Workshop
January 17, 2008 Transition States in Protein Folding
Thomas Weikl (Max Planck Institute for Colloids and Interfaces)
Annual Program Workshop
January 17, 2008 The Energy Landscape for Folding and Molecular Motors
José Onuchic (University of California, San Diego)
Annual Program Workshop

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