Summer Program: Statistics in the Health Sciences
Week 1
Genetics
July 7-11, 1997
Organizers:
Seymour
Geisser (University of Minnesota)
Elizabeth Halloran
(Emory University)
Statistical methods for population genetics are finding increasing areas of
application, including DNA profiles, evolutionary phylogenies, hereditary
disease patterns based on mitochondrial DNA, and even the origins and spread of
language.
DNA profiles of several genetic loci are an important tool for identification
to measure alleles in hypervariable loci, whether based on RFLP or PCR
techniques. The use of these techniques, however, to ascertain similarity of
two profiles and to estimate the relative frequency of a profile in a
specified population and their underlying statistics have been the subject of
much heated debate.
The building of evolutionary trees to establish phylogenies, or the relations
between organisms, families, or species, is another important area of
population genetics. In the medical sciences this is particularly important
in the area of microbiology and parasitology. Examples include malaria, HIV,
and tuberculosis. It is also used in studies of descent based on
mitochondrial DNA. Mitochondrial DNA is inherited from the mother, so
requires different statistical approaches than the usual linkage analysis based
on nuclear DNA. Several difficult statistical issues arise in phylogeny
building. One is the alignment of sequences. Second is the estimation of the
distances based on some assumed evolutionary model. Third is the building of
a tree structure based on a clustering algorithm. Fourth, is the problem of
inference about the complex tree structure that was obtained. Methods of
inference include likelihood methods and bootstrapping, but neither is
well-understood in this application.
The statistical methods of population genetics and for the analysis of disease
patterns based on mitochondrial DNA have lagged behind those for linkage
analysis based on nuclear DNA. This workshop will be a unique opportunity for
top-level statisticians to meet with quantitative geneticists to advance
the statistical underpinnings of these emerging problems.
All talks are in Vincent Hall Room 570 unless otherwise noted.
| SCHEDULE for MONDAY, JULY 7 |
| 8:45 am |
Registration and Coffee |
Vincent Hall Room 502 |
| 9:15 am |
A. Friedman, R. Gulliver, E. Halloran |
Welcome and Orientation |
| 9:30 am |
Bruce Weir, North Carolina State Univ. |
Effects of population structure on paternity calculations |
| 10:30 am |
Break |
Vincent Hall Room 502 |
| 11:00 am |
Seymour Geisser, University of Minnesota |
A Critique of Forensic Laboratories' Use of Statistics for
RFLP-DNA Matching and Profiling |
| 2:00 pm |
Laurence Mueller, Univ. of California-Irvine |
The DNA Typing Controversy and NRC
II |
| 3:00 pm |
Discussion Session |
Future Directions in DNA Typing |
| 4:00 pm |
IMA Tea |
Vincent Hall Room 502 |
| SCHEDULE for TUESDAY, JULY 8 |
| 9:15 am |
Coffee |
Vincent Hall Room 502 |
| 9:30 am |
Susan Holmes, Cornell University |
Evaluating Phylogenies built from Molecular Data |
| 10:30 am |
Coffee |
Vincent Hall Room 502 |
| 11:00 am |
Elizabeth Halloran, Emory University |
Bootstrap Confidence Levels for Phylogenic Trees |
| 2:00 pm |
Bradley Efron, Stanford University |
The Problem of Regions |
| SCHEDULE for WEDNESDAY, JULY
10 |
| 9:15 am |
Coffee |
Vincent Hall Room 502 |
| 9:30 am |
Terry Speed, Univ. of California, Berkeley |
Mapping disease genes using identity by descent data |
| 10:30 am |
Break |
Vincent Hall Room 502 |
| 11:00 am |
Herman Chernoff, Harvard University |
The Bootstrap in Phylogenetic Analysis With Low Coverage |
| 2:00 pm |
Wen-Hsiung Li, University of Texas |
to be announced |
| 3:00 pm |
Discussion Session |
Inference in Evolutionary Theroy and Population Genetics: How to deal with
the statistically difficult problems? |
| SCHEDULE for THURSDAY, JUNE 12 |
| 9:15 am |
Coffee |
Vincent Hall Room 502 |
| 9:30 am |
Warren J. Ewens, University of Pennsylvania |
Statistics in human
genetics |
| 10:30 am |
Break |
Vincent Hall Room 502 |
| 11:00 am |
Eleanor Feingold, Emory University |
Mapping disease genes by searching for shared genomic segments among
distant relatives |
| 2:00 pm |
Michael Newton, Univ. of Wisconsin-Madison |
On the statistical analysis of allelic-loss data |
| 6:00 pm |
Workshop Buffet |
Courtyard and Vincent Hall 120 |
| SCHEDULE for FRIDAY, JULY 11 |
| 9:15 am |
Coffee |
Vincent Hall Room 502 |
| 9:30 am |
Fengzhu Sun, Emory University |
New Development of Statistical Methods for Testing Mitochondrial DNA
Mutation Involvement in Complex Diseases |
| 10:30 am |
Break |
Vincent Hall Room 502 |
| 11:00 am |
Charles Geyer, University of Minnesota |
to be announced |
| 12:00-12:30 pm |
Discussion Session |
Statistics in Disease Genetics; Statistics in the Genome Project |
top of page
Week 1: Genetics
July 7-11, 1997
Week 2: Imaging
July 14-17, 1997
Week 3: Diagnosis & Prediction
July 21-25, 1997
Weeks 4 & 5: Design & Analysis of Clinical Trials
July 28 - August 7, 1997
Week 6: Statistics & Epidemiology:Environment and Health
August 18-21, 1997
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Sciences Page
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